dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00553
Location and strand information: 23862 - 24686 (-)
Family: 3.A.1.15.13
Protein type: TC
Protein description: High-affinity zinc uptake system membrane protein ZnuB

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00554
Location and strand information: 24731 - 25159 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00555
Location and strand information: 25302 - 25514 (+)
Family: null
Protein type: null
Protein description: Sec-independent protein translocase protein TatA

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00556
Location and strand information: 25522 - 26355 (+)
Family: 2.A.64.2.1
Protein type: TC
Protein description: Sec-independent protein translocase protein TatC

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00557
Location and strand information: 26352 - 29780 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00558
Location and strand information: 30307 - 34410 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00559
Location and strand information: 34853 - 38080 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00560
Location and strand information: 38102 - 39856 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00561
Location and strand information: 39876 - 40589 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00562
Location and strand information: 40873 - 43374 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6682
Protein molecular weight: 95275.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00563
Location and strand information: 43394 - 45109 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5095
Protein molecular weight: 63982.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00564
Location and strand information: 45155 - 46795 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00565
Location and strand information: 46818 - 48314 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00566
Location and strand information: 48337 - 51063 (+)
Family: GH10|GH43_12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0762
Protein molecular weight: 100700.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00567
Location and strand information: 51114 - 52088 (+)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.6967
Protein molecular weight: 37094.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00568
Location and strand information: 52094 - 53074 (+)
Family: null
Protein type: null
Protein description: scyllo-inositol 2-dehydrogenase (NADP(+)) IolU

Gene clsuter ID: MGYG000002585_7|CGC2
Gene ID: MGYG000002585_00569
Location and strand information: 53133 - 55136 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.8393
Protein molecular weight: 75962.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002585_00553	High-affinity zinc uptake system membrane protein ZnuB	TC	23862	24686	-	3.A.1.15.13
MGYG000002585_00554	hypothetical protein	null	24731	25159	-	No domain
MGYG000002585_00555	Sec-independent protein translocase protein TatA	null	25302	25514	+	TatA_B_E
MGYG000002585_00556	Sec-independent protein translocase protein TatC	TC	25522	26355	+	2.A.64.2.1
MGYG000002585_00557	hypothetical protein	null	26352	29780	+	AAA_19\| AAA_12
MGYG000002585_00558	Sensor histidine kinase RcsC	TF	30307	34410	-	HTH_AraC+HTH_AraC
MGYG000002585_00559	TonB-dependent receptor SusC	TC	34853	38080	+	1.B.14.6.1
MGYG000002585_00560	hypothetical protein	null	38102	39856	+	SusD-like_3\| SusD_RagB
MGYG000002585_00561	hypothetical protein	null	39876	40589	+	No domain
MGYG000002585_00562	hypothetical protein	CAZyme	40873	43374	+	GH115
MGYG000002585_00563	hypothetical protein	CAZyme	43394	45109	+	GH35
MGYG000002585_00564	hypothetical protein	null	45155	46795	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000002585_00565	Inner membrane symporter YicJ	TC	46818	48314	+	2.A.2.3.4
MGYG000002585_00566	hypothetical protein	CAZyme	48337	51063	+	GH10\| GH43_12
MGYG000002585_00567	Xylosidase/arabinosidase	CAZyme	51114	52088	+	GH43\| GH43_1
MGYG000002585_00568	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	null	52094	53074	+	GFO_IDH_MocA
MGYG000002585_00569	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	53133	55136	+	GH67
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002585_00562	GH115_e2\|3.2.1.131	xylan
MGYG000002585_00563
MGYG000002585_00566	GH10_e61
MGYG000002585_00567	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000002585_00569	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan